PhanerochaeteV1, Main, Exploration, bibRecord, 000672

Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM41 grown on softwood.

Identifieur interne : 000672 ( Main/Exploration ); précédent : 000671; suivant : 000673

Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM41 grown on softwood.

Auteurs : Holy Ravalason [France] ; Gwénaël Jan ; Daniel Mollé ; Maryvonne Pasco ; Pedro M. Coutinho ; Catherine Lapierre ; Brigitte Pollet ; Frédérique Bertaud ; Michel Petit-Conil ; Sacha Grisel ; Jean-Claude Sigoillot ; Marcel Asther ; Isabelle Herpoël-Gimbert

Source :

Applied microbiology and biotechnology [ 1432-0614 ] ; 2008.

RBID : pubmed:18654772

Descripteurs français

English descriptors

KwdEn :
- Amino Acid Sequence (MeSH), Electrophoresis, Gel, Two-Dimensional (MeSH), Extracellular Space (chemistry), Extracellular Space (genetics), Extracellular Space (metabolism), Fungal Proteins (chemistry), Fungal Proteins (genetics), Fungal Proteins (metabolism), Industrial Microbiology (MeSH), Lignin (chemistry), Lignin (metabolism), Molecular Sequence Data (MeSH), Phanerochaete (chemistry), Phanerochaete (genetics), Phanerochaete (metabolism), Protein Transport (MeSH), Proteomics (MeSH), Wood (chemistry), Wood (metabolism).
MESH :
- chemical , chemistry : Fungal Proteins, Lignin.
- chemistry : Extracellular Space, Phanerochaete, Wood.
- genetics : Extracellular Space, Fungal Proteins, Phanerochaete.
- metabolism : Extracellular Space, Fungal Proteins, Lignin, Phanerochaete, Wood.
- Amino Acid Sequence, Electrophoresis, Gel, Two-Dimensional, Industrial Microbiology, Molecular Sequence Data, Protein Transport, Proteomics.

Abstract

Proteomic analysis was performed to determine and differentiate the composition of the secretomes of Phanerochaete chrysosporium CIRM-BRFM41, a peroxidase hypersecretory strain grown under ligninolytic conditions and on softwood chips under biopulping conditions. Extracellular proteins from both cultures were analyzed by bidimensional gel electrophoresis and matrix-assisted laser desorption/ionization time-of-flight tandem mass spectrometry. A total of 37 spots were identified. The secretome in liquid synthetic medium comprised mainly peroxidases, while several wood-degrading enzymes and enzymes involved in fungal metabolism were detected in biopulping cultures on softwood. This prompted an analysis of the impact of secretome modulation in the presence of softwood chips. Biotreated wood was submitted to kraft cooking and chemical bleaching using chlorine dioxide. The fungal pre-treatment led to a significant increase in pulp yield and a better bleachability of the pulp. This bleachability improvement could be explained by the production of specific lignocellulose-degrading enzymes.

DOI: 10.1007/s00253-008-1596-x
PubMed: 18654772

Affiliations:

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000674
to stream Main, to step Curation: 000674

Le document en format XML

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<term>Electrophoresis, Gel, Two-Dimensional (MeSH)</term>
<term>Extracellular Space (chemistry)</term>
<term>Extracellular Space (genetics)</term>
<term>Extracellular Space (metabolism)</term>
<term>Fungal Proteins (chemistry)</term>
<term>Fungal Proteins (genetics)</term>
<term>Fungal Proteins (metabolism)</term>
<term>Industrial Microbiology (MeSH)</term>
<term>Lignin (chemistry)</term>
<term>Lignin (metabolism)</term>
<term>Molecular Sequence Data (MeSH)</term>
<term>Phanerochaete (chemistry)</term>
<term>Phanerochaete (genetics)</term>
<term>Phanerochaete (metabolism)</term>
<term>Protein Transport (MeSH)</term>
<term>Proteomics (MeSH)</term>
<term>Wood (chemistry)</term>
<term>Wood (metabolism)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Bois (composition chimique)</term>
<term>Bois (métabolisme)</term>
<term>Données de séquences moléculaires (MeSH)</term>
<term>Espace extracellulaire (composition chimique)</term>
<term>Espace extracellulaire (génétique)</term>
<term>Espace extracellulaire (métabolisme)</term>
<term>Lignine (composition chimique)</term>
<term>Lignine (métabolisme)</term>
<term>Microbiologie industrielle (MeSH)</term>
<term>Phanerochaete (composition chimique)</term>
<term>Phanerochaete (génétique)</term>
<term>Phanerochaete (métabolisme)</term>
<term>Protéines fongiques (composition chimique)</term>
<term>Protéines fongiques (génétique)</term>
<term>Protéines fongiques (métabolisme)</term>
<term>Protéomique (MeSH)</term>
<term>Séquence d'acides aminés (MeSH)</term>
<term>Transport des protéines (MeSH)</term>
<term>Électrophorèse bidimensionnelle sur gel (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Fungal Proteins</term>
<term>Lignin</term>
</keywords>
<keywords scheme="MESH" qualifier="chemistry" xml:lang="en"><term>Extracellular Space</term>
<term>Phanerochaete</term>
<term>Wood</term>
</keywords>
<keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Bois</term>
<term>Espace extracellulaire</term>
<term>Lignine</term>
<term>Phanerochaete</term>
<term>Protéines fongiques</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Extracellular Space</term>
<term>Fungal Proteins</term>
<term>Phanerochaete</term>
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<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Espace extracellulaire</term>
<term>Phanerochaete</term>
<term>Protéines fongiques</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Extracellular Space</term>
<term>Fungal Proteins</term>
<term>Lignin</term>
<term>Phanerochaete</term>
<term>Wood</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Bois</term>
<term>Espace extracellulaire</term>
<term>Lignine</term>
<term>Phanerochaete</term>
<term>Protéines fongiques</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term>
<term>Electrophoresis, Gel, Two-Dimensional</term>
<term>Industrial Microbiology</term>
<term>Molecular Sequence Data</term>
<term>Protein Transport</term>
<term>Proteomics</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Données de séquences moléculaires</term>
<term>Microbiologie industrielle</term>
<term>Protéomique</term>
<term>Séquence d'acides aminés</term>
<term>Transport des protéines</term>
<term>Électrophorèse bidimensionnelle sur gel</term>
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<front><div type="abstract" xml:lang="en">Proteomic analysis was performed to determine and differentiate the composition of the secretomes of Phanerochaete chrysosporium CIRM-BRFM41, a peroxidase hypersecretory strain grown under ligninolytic conditions and on softwood chips under biopulping conditions. Extracellular proteins from both cultures were analyzed by bidimensional gel electrophoresis and matrix-assisted laser desorption/ionization time-of-flight tandem mass spectrometry. A total of 37 spots were identified. The secretome in liquid synthetic medium comprised mainly peroxidases, while several wood-degrading enzymes and enzymes involved in fungal metabolism were detected in biopulping cultures on softwood. This prompted an analysis of the impact of secretome modulation in the presence of softwood chips. Biotreated wood was submitted to kraft cooking and chemical bleaching using chlorine dioxide. The fungal pre-treatment led to a significant increase in pulp yield and a better bleachability of the pulp. This bleachability improvement could be explained by the production of specific lignocellulose-degrading enzymes.</div>
</front>
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<ArticleTitle>Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM41 grown on softwood.</ArticleTitle>
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<Abstract><AbstractText>Proteomic analysis was performed to determine and differentiate the composition of the secretomes of Phanerochaete chrysosporium CIRM-BRFM41, a peroxidase hypersecretory strain grown under ligninolytic conditions and on softwood chips under biopulping conditions. Extracellular proteins from both cultures were analyzed by bidimensional gel electrophoresis and matrix-assisted laser desorption/ionization time-of-flight tandem mass spectrometry. A total of 37 spots were identified. The secretome in liquid synthetic medium comprised mainly peroxidases, while several wood-degrading enzymes and enzymes involved in fungal metabolism were detected in biopulping cultures on softwood. This prompted an analysis of the impact of secretome modulation in the presence of softwood chips. Biotreated wood was submitted to kraft cooking and chemical bleaching using chlorine dioxide. The fungal pre-treatment led to a significant increase in pulp yield and a better bleachability of the pulp. This bleachability improvement could be explained by the production of specific lignocellulose-degrading enzymes.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Ravalason</LastName>
<ForeName>Holy</ForeName>
<Initials>H</Initials>
<AffiliationInfo><Affiliation>INRA, UMR1163, Biotechnologie des Champignons Filamenteux, 13000, Marseille, France. holy.ravalason@esil.univmed.fr</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Jan</LastName>
<ForeName>Gwénaël</ForeName>
<Initials>G</Initials>
</Author>
<Author ValidYN="Y"><LastName>Mollé</LastName>
<ForeName>Daniel</ForeName>
<Initials>D</Initials>
</Author>
<Author ValidYN="Y"><LastName>Pasco</LastName>
<ForeName>Maryvonne</ForeName>
<Initials>M</Initials>
</Author>
<Author ValidYN="Y"><LastName>Coutinho</LastName>
<ForeName>Pedro M</ForeName>
<Initials>PM</Initials>
</Author>
<Author ValidYN="Y"><LastName>Lapierre</LastName>
<ForeName>Catherine</ForeName>
<Initials>C</Initials>
</Author>
<Author ValidYN="Y"><LastName>Pollet</LastName>
<ForeName>Brigitte</ForeName>
<Initials>B</Initials>
</Author>
<Author ValidYN="Y"><LastName>Bertaud</LastName>
<ForeName>Frédérique</ForeName>
<Initials>F</Initials>
</Author>
<Author ValidYN="Y"><LastName>Petit-Conil</LastName>
<ForeName>Michel</ForeName>
<Initials>M</Initials>
</Author>
<Author ValidYN="Y"><LastName>Grisel</LastName>
<ForeName>Sacha</ForeName>
<Initials>S</Initials>
</Author>
<Author ValidYN="Y"><LastName>Sigoillot</LastName>
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<Initials>JC</Initials>
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<Author ValidYN="Y"><LastName>Asther</LastName>
<ForeName>Marcel</ForeName>
<Initials>M</Initials>
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<Author ValidYN="Y"><LastName>Herpoël-Gimbert</LastName>
<ForeName>Isabelle</ForeName>
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<name sortKey="Bertaud, Frederique" sort="Bertaud, Frederique" uniqKey="Bertaud F" first="Frédérique" last="Bertaud">Frédérique Bertaud</name>
<name sortKey="Coutinho, Pedro M" sort="Coutinho, Pedro M" uniqKey="Coutinho P" first="Pedro M" last="Coutinho">Pedro M. Coutinho</name>
<name sortKey="Grisel, Sacha" sort="Grisel, Sacha" uniqKey="Grisel S" first="Sacha" last="Grisel">Sacha Grisel</name>
<name sortKey="Herpoel Gimbert, Isabelle" sort="Herpoel Gimbert, Isabelle" uniqKey="Herpoel Gimbert I" first="Isabelle" last="Herpoël-Gimbert">Isabelle Herpoël-Gimbert</name>
<name sortKey="Jan, Gwenael" sort="Jan, Gwenael" uniqKey="Jan G" first="Gwénaël" last="Jan">Gwénaël Jan</name>
<name sortKey="Lapierre, Catherine" sort="Lapierre, Catherine" uniqKey="Lapierre C" first="Catherine" last="Lapierre">Catherine Lapierre</name>
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<name sortKey="Pasco, Maryvonne" sort="Pasco, Maryvonne" uniqKey="Pasco M" first="Maryvonne" last="Pasco">Maryvonne Pasco</name>
<name sortKey="Petit Conil, Michel" sort="Petit Conil, Michel" uniqKey="Petit Conil M" first="Michel" last="Petit-Conil">Michel Petit-Conil</name>
<name sortKey="Pollet, Brigitte" sort="Pollet, Brigitte" uniqKey="Pollet B" first="Brigitte" last="Pollet">Brigitte Pollet</name>
<name sortKey="Sigoillot, Jean Claude" sort="Sigoillot, Jean Claude" uniqKey="Sigoillot J" first="Jean-Claude" last="Sigoillot">Jean-Claude Sigoillot</name>
</noCountry>
<country name="France"><region name="Provence-Alpes-Côte d'Azur"><name sortKey="Ravalason, Holy" sort="Ravalason, Holy" uniqKey="Ravalason H" first="Holy" last="Ravalason">Holy Ravalason</name>
</region>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PhanerochaeteV1/Data/Main/Exploration

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000672 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000672 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    PhanerochaeteV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:18654772
   |texte=   Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM41 grown on softwood.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:18654772" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a PhanerochaeteV1

This area was generated with Dilib version V0.6.37.
Data generation: Fri Nov 13 18:33:39 2020. Site generation: Fri Nov 13 18:35:20 2020

	Serveur d'exploration sur le phanerochaete
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration sur le phanerochaete

Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM41 grown on softwood.

Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM41 grown on softwood.

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Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki